| All In a Day's Work | Complete the game | Gold |
| Bad Case of Gas | Defeat 25 Gas Infantry | Bronze |
| Block Party | Collect both of Bloxx's Upgrade Tokens in Single Player | Bronze |
| Breakout | Smash 25 Breakable Walls | Bronze |
| Bullseye! | Detonate 150 Explosive Walls with a projectile | Silver |
| Can't We All Just Get Along? | Defeat all Arena Challenges | Gold |
| Challenge Accepted | Collect all the Arena Challenge Tokens | Silver |
| Check Out These Pythons | Collect both of FourArm's Upgrade Tokens in Single Player | Bronze |
| Do You Even Lift? | Defeat 25 Powerlifters | Bronze |
| Fastball Special | Detonate 25 Explosive Walls with a projectile | Bronze |
| Flame Retardant | Defeat 25 Fire Infantry | Bronze |
| Frozen Assets | Defeat 25 Ice Infantry | Bronze |
| Hero | Complete the game on Hero Difficulty | Gold |
| How I Roll | Collect both of Cannonbolt's Upgrade Tokens in Single Player | Bronze |
| I'm Cool Like That | Collect both of Big Chill's Upgrade Tokens in Single Player | Bronze |
| I'm Not Dead Yet! | Change from Ben back into an Alien Form without dying | Silver |
| Incursean Incursion | Complete Level 2 | Bronze |
| Infiltrate Exterminate | Complete Level 5 | Bronze |
| Jump, Jump | Leap over 75 Jumpable Walls | Bronze |
| Kill You Last | Defeat 25 Commandos | Bronze |
| Lack of Communication | Complete Level 1 | Bronze |
| Leapfrog | Leap over 25 Jumpable Walls | Bronze |
| Learned Scholar | Complete the Tutorial Level | Bronze |
| Lillypad Shootout | Defeat 25 Toad Assault Mercs | Bronze |
| Long Jump | Jump over 20 pits | Bronze |
| Marathon Man | Run 42,195 meters | Bronze |
| More Power! | Collect 1,000 Omnitrix Energy Orbs | Silver |
| New Kid on the Block | Complete Level 3 | Bronze |
| Newtonian Alien | Collect both of Gravattack's Upgrade Tokens in Single Player | Bronze |
| Not Just Another Toadie | Defeat 25 Toad Battlers | Bronze |
| Outta There! | Complete Level 6 | Bronze |
| Platinum | Earn every Trophy in the game. | Platinum |
| Return To Sender | Use the "Return to Azmuth" option in the Pause Menu | Bronze |
| Sharpshooter | Detonate 75 Explosive Walls with a projectile | Bronze |
| Smash and Grab | Smash 150 Breakable Walls | Silver |
| Speedy Recovery | Collect both of XLR8's Upgrade Tokens in Single Player | Bronze |
| Spring Shoes | Leap over 150 Jumpable Walls | Silver |
| Super-Chirp | Collect both of Crashhopper's Upgrade Tokens in Single Player | Bronze |
| Tank Spanker | Defeat 25 Toad Tank Mechs | Bronze |
| Tastes Like Chicken | Collect both of Bullfrag's Upgrade Tokens in Single Player | Bronze |
| Underground Scene | Complete Level 4 | Bronze |
| Wing and a Prayer | Collect both of Astrodactyl's Upgrade Tokens in Single Player | Bronze |
| Wrecking Crew | Smash 75 Breakable Walls | Bronze |
| You Break it, You Bought it! | Break 100 Omnitrix Energy containers | Silver |
| You're On Fire! | Collect both of Swampfire's Upgrade Tokens in Single Player | Bronze |
